OpenMS

An open-source framework for mass spectrometry and TOPP – The OpenMS Proteomics Pipeline

Getting Started

OpenMS comes in different flavors targeted at:

  • Application users that want to run proven analysis workflows in Thermo Fisher ProteomeDiscoverer or CompoundDiscoverer
  • Expert data analysts and bioinformatician that want to create highly configurable custom workflows in several workflow systems, including the industry strength  integration platform KNIME
  • Software developers that want to rapidly create novel tools and computational methods using a rich set of functionality and well tested algorithms